Everything went just as Weisheit planned and every Magus has ceased functioning. However, Noir is the only Magus unaffected due to her unique origins. Now all hope rests on her shoulders. The time has come for Kanata and Noir to face off against Weisheit in their final battle.
Kanata decides to chase Weisheit down in the last remaining rocket to get Mystere back. He and Noir say their goodbyes to the people of Rock Town before finally arriving at Histoire, where Weisheit is eagerly waiting for them.
Pascale left a message detailing Noir and Mystere's past. It was a story that began when they first made contact with Histoire. Meanwhile, Macht reminisces about the time he entered into his contract with Schnee...
Betrayed by a trusted ally, Kanata is taken prisoner. To make matters worse, two more of his friends are seen standing among Ideal's members. With a final twist of the proverbial knife, Weisheit reveals a shocking past.
Kanata heads to nearby Carthago, which supposedly has an old spaceport, in his search for clues to the legendary Histoire. He tries to gain access, but is suddenly attacked. When he confronts the attackers, Kanata is challenged to a duel for his Magus.
Mystere tells Kanata that Histoire really does exist. As proof, she and her former master had once made contact with Histoire's network during their travels. However, if Kanata is ever going to make it to Histoire, he will need to undergo some training.
A few days have passed since the heated battle against Silver Storm, but Noir still has not returned to her normal self after transforming into Mystere. Kanata takes Mystere to places where he and Noir shared memories in the hopes it will help wake Noir.
It is the final leg in the battle against the Silver Storm. No one is left unscathed and though Kanata refuses to give up, even the upgraded DAISYOGRE is desperately struggling. In this fight to the death, Noir's worries reach a climax and she undergoes a transformation.
Kanata investigates who is behind the destruction of the Nests surrounding Rock Town.
On the way to Traders Nest, Kanata witnesses a lone Drifter walking in the rain.
Kanata invites Ellie to Satellite Aqua. Thinking it is a date, Ellie finds the whole gang there.
Kanata wants to learn more about Noir's past.
After getting caught in the rain, Kanata and Tokio seek shelter in Baccarat Nest, where they run into Ciel.
To become a stronger Drifter, Kanata must strengthen his bond with his Magus; Kanata makes his way to the Fes maze with Noir; a group attacking Amasian Type Zero Magus and their Drifters comes to Tokio's attention.
Kanata battles Enders without Noir to become stronger; he is saved by Claudia and Flamme, who have a request for him.
Kanata becomes Noir's master; Tokio takes Kanata to Desire Nest to turn him into a real man.
Kanata returns to the ruins where he found Noir to uncover the truth about her past; Range meets Ciel, a Magus, after attempting to lure Noir away from town.
Kanata and Tokio discover a Magus with no memories; Rock Town is in danger when the Enders attack.